Smoothed particle hydrodynamics for root growth mechanics

DOI10.1016/J.ENGANABOUND.2019.03.025MaRDI QIDQ2420331zbMATH OpenOpenAlexWikidataFDO

Authors Matthias Mimault, Mariya Ptashnyk, George W. Bassel, Lionel Xavier Dupuy

Publication date 6 June 2019

Published in Engineering Analysis with Boundary Elements (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.enganabound.2019.03.025

zbMATH Keywords

cell divisionsmoothed particle hydrodynamicsanisotropic materialdualsphysicsroot growth model

Mathematics Subject Classification ID

Probabilistic methods, particle methods, etc. for initial value and initial-boundary value problems involving PDEs (65M75) Particle methods and lattice-gas methods (76M28) Plant biology (92C80)

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• A 3-D coupled smoothed particle hydrodynamics and coarse-grained model to simulate drying mechanisms of small cell aggregates
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Cites work

• A consistent multi-resolution smoothed particle hydrodynamics method
• A new open boundary formulation for incompressible SPH
• Analysis and improvements of adaptive particle refinement (APR) through CPU time, accuracy and robustness considerations
• Computational modeling of growth. A critical review, a classification of concepts and two new consistent approaches
• Deformable cell model and its application to growth of plant meristem
• DualSPHysics: Open-source parallel CFD solver based on smoothed particle hydrodynamics (SPH)
• Evaluation of accuracy and stability of the classical SPH method under uniaxial compression
• Homogenization of biomechanical models for plant tissues
• Mathematical modelling of auxin transport in plant tissues: flux meets signalling and growth
• Model for calcium dependent oscillatory growth in pollen tubes
• Modeling growth in biological materials
• Piecewise polynomial, positive definite and compactly supported radial functions of minimal degree
• SPH elastic dynamics
• Smoothed particle hydrodynamics (SPH): an overview and recent developments
• Smoothed particle hydrodynamics and its diverse applications
• Smoothed particle hydrodynamics: theory and application to non-spherical stars
• The impact of microfibril orientations on the biomechanics of plant cell walls and tissues
• The mathematics and mechanics of biological growth
• Variable resolution for SPH in three dimensions: towards optimal splitting and coalescing for dynamic adaptivity
• Variable resolution for SPH: a dynamic particle coalescing and splitting scheme

Cited in

(6)

• A 3-D coupled smoothed particle hydrodynamics and coarse-grained model to simulate drying mechanisms of small cell aggregates
• An algorithm for the simulation of the growth of root systems on deformable domains
• Homogenization of biomechanical models of plant tissues with randomly distributed cells
• Simulation of plant cell shrinkage during drying -- a SPH-DEM approach
• Deformable cell model and its application to growth of plant meristem
• A coupled SPH-DEM model for micro-scale structural deformations of plant cells during drying

Describes a project that uses

Uses Software

• PHANTOM
• MorphoGraphX
• DualSPHysics
• NDSPMHD

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