Predicting protein secondary structure based on Bayesian classification procedures on Markovian chains

DOI10.1007/S10559-007-0039-5zbMATH Open1123.62085OpenAlexW1978047608MaRDI QIDQ2458044FDOQ2458044

Authors: B. A. Beletskii, S. V. Vasiliev, I. V. Sergienko, Anatol M. Gupal 

Publication date: 31 October 2007

Published in: Cybernetics and Systems Analysis (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s10559-007-0039-5

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zbMATH Keywords

classificationMarkovian chainBayesian procedureprotein secondary structurelearning sampleprocedure accuracy

Mathematics Subject Classification ID

Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Bayesian inference (62F15) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40)

Cites Work

• Statistical Inference about Markov Chains
• Bioinformatics. The machine learning approach.
• Efficiency of Bayesian classification procedure
• Design principles for inductive inference procedures

Cited In (15)

• A hidden Markov model applied to the protein 3D structure analysis
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• Prediction of protein interdomain linker regions by a nonstationary hidden Markov model
• A composite approach to protein tertiary structure prediction: hidden Markov model based on lattice
• Bayesian approach, theory of empirical risk minimization. Comparative analysis
• Methods to predict protein spatial structure
• Predicting torsion angles in amino acid protein sequences based on a Bayesian classification procedure on Markov chains
• Using compositions of Markov models to determine functional gene fragments
• Optimal pattern recognition procedures and their application
• A segmental semi Markov model for protein secondary structure prediction
• An investigation of amino acid order based on amino acid classification
• Predicting gene structure with the use of mixtures of probability distributions
• A method for protein accessibility prediction based on residue types and conformational states
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