Solvable models of neighbor-dependent substitution processes

DOI10.1016/J.MBS.2007.10.001MaRDI QIDQ2476835zbMATH OpenOpenAlexWikidataFDO

Authors Jean Bérard, Jean-Baptiste Gouéré, Didier Piau

Publication date 12 March 2008

Published in Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.mbs.2007.10.001

zbMATH Keywords

CpG deficiencyexactly solvable modelsPoisson processesstochastic models of nucleotide substitution

Mathematics Subject Classification ID

Signal detection and filtering (aspects of stochastic processes) (60G35) Markov processes (60J99) Biochemistry, molecular biology (92C40)

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Cites work

• Exact sampling with coupled Markov chains and applications to statistical mechanics
• scientific article; zbMATH DE number 706263 (Why is no real title available?)
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Cited in

(6)

• A unified approach to the transition matrices of DNA substitution models
• Substitution Markov chains and Martin boundaries
• Ergodicity of some dynamics of DNA sequences
• Pseudo-likelihood for Non-reversible Nucleotide Substitution Models with Neighbour Dependent Rates
• Concentration inequality for evolutionary trees
• Phylogenetic distances for neighbour dependent substitution processes

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