On reducing the statespace of hidden Markov models for the identity by descent process

DOI10.1006/TPBI.2002.1583MaRDI QIDQ2483952zbMATH OpenOpenAlexWikidataFDO

Authors Sharon Guy Browning, Brian L. Browning

Publication date 1 August 2005

Published in Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1006/tpbi.2002.1583

zbMATH Keywords

hidden Markov modelsrelationship inferenceidentity by descentgenetic linkage analysis

Mathematics Subject Classification ID

Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Genetics and epigenetics (92D10) Problems related to evolution (92D15)

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Cites work

• scientific article; zbMATH DE number 1750194 (Why is no real title available?)
• A Markovian Function of a Markov Chain
• Finite Continuous Time Markov Chains
• Gene Identities and Multiple Relationships
• Statistical inference from genetic data on pedigrees
• The probability that related individuals share some section of genome identical by descent

Cited in

(2)

• A sufficient condition for reducing recursions in hidden Markov models
• A sequential pruning strategy for the selection of the number of states in hidden Markov models

Describes a project that uses

Uses Software

• GENEHUNTER

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