Stochastic approaches for modelling in vivo reactions
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Publication:2490589
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Cites work
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- Bistability and switching in the lysis/lysogeny genetic regulatory network of bacteriophage
- Brownian motion in a field of force and the diffusion model of chemical reactions
- Enzyme kinetics at high enzyme concentration
- Enzyme kinetics far from the standard quasi-steady-state and equilibrium approximations
- scientific article; zbMATH DE number 52118 (Why is no real title available?)
- scientific article; zbMATH DE number 54145 (Why is no real title available?)
- scientific article; zbMATH DE number 1090658 (Why is no real title available?)
Cited in
(52)- Discrete-time stochastic modeling and simulation of biochemical networks
- Robust stability of stochastic genetic regulatory networks with discrete and distributed delays
- Size-independent differences between the mean of discrete stochastic systems and the corresponding continuous deterministic systems
- Approximate Michaelis-Menten kinetics displayed in a stochastic model of cell-mediated cytotoxicity
- Investigating the two-moment characterisation of subcellular biochemical networks
- Towards uncertainty quantification and inference in the stochastic SIR epidemic model
- Controlled diffusion processes with Markovian switchings for modeling dynamical engineering systems
- Discrete-state stochastic models of calcium-regulated calcium influx and subspace dynamics are not well-approximated by ODEs that neglect concentration fluctuations
- Stochastic aspects of asymmetric autocatalysis and absolute asymmetric synthesis
- The quasi-steady-state approximations revisited: timescales, small parameters, singularities, and normal forms in enzyme kinetics
- Multifractality in intracellular enzymatic reactions
- Sustained oscillations via coherence resonance in SIR
- Quasi-steady-state kinetics at enzyme and substrate concentrations in excess of the Michaelis-Menten constant
- Studying genetic regulatory networks at the molecular level: delayed reaction stochastic models
- Phantom bursting is highly sensitive to noise and unlikely to account for slow bursting in \(\beta\)-cells: considerations in favor of metabolically driven oscillations
- Evolution of complex probability distributions in enzyme cascades
- Approximate analysis of biological systems by hybrid switching jump diffusion
- Stochastic modelling of PTEN regulation in brain tumors: a model for glioblastoma multiforme
- The total quasi-steady-state approximation for fully competitive enzyme reactions
- A quasistationary analysis of a stochastic chemical reaction: Keizer's paradox
- Monte Carlo simulations of enzymatic reactions in crowded media. Effect of the enzyme-obstacle relative size
- The sorting direct method for stochastic simulation of biochemical systems with varying reaction execution behavior
- Stochastic vs. deterministic uptake of dodecanedioic acid by isolated rat livers
- The effect of loss of immunity on noise-induced sustained oscillations in epidemics
- A mesoscopic simulation approach for modeling intracellular reactions
- Modelling of biochemical reactions by stochastic automata networks
- Approximation and inference methods for stochastic biochemical kinetics -- a tutorial review
- Optimization problems in chemical reactions using continuous-time Markov chains
- Smoluchowski Reaction Kinetics for Reactions of Any Order
- Formalisms for specifying Markovian population models
- Computational Probability for Systems Biology
- Formalisms for Specifying Markovian Population Models
- Delay-dependent global asymptotic stability criteria for stochastic genetic regulatory networks with Markovian jumping parameters
- Hunting : the origin and validity of quasi-steady-state reductions in enzyme kinetics
- Accurate Particle-Based Reaction Algorithms for Fixed Timestep Simulators
- Stochastic effects in signaling pathways in cells: interaction between visualization and modeling
- Approximation of event probabilities in noisy cellular processes
- Modelling intracellular fate of FGF receptors with BioAmbients
- Mean square exponential stability of stochastic genetic regulatory networks with time-varying delays
- Novel techniques in parameter estimation for fractional dynamical models arising from biological systems
- A stochastic model of hormesis
- Delay-probability-distribution-dependent stability of uncertain stochastic genetic regulatory networks with mixed time-varying delays: an LMI approach
- Single-variable reaction systems: Deterministic and stochastic models
- Developing Itô stochastic differential equation models for neuronal signal transduction path\-ways
- Solving the chemical master equation for monomolecular reaction systems analytically
- Strong approximations of stochastic differential equations with jumps
- Coexistence of activator and inhibitor for Brusselator diffusion system in chemical or biochemical reactions
- Estimating epidemic parameters: application to H1N1 pandemic data
- Deterministic and stochastic models of enzymatic networks-applications to pharmaceutical research
- Stochastic simulation of chemical reactions in spatially complex media
- Effects of intrinsic and extrinsic noise can accelerate juxtacrine pattern formation
- Chemical master equation and Langevin regimes for a gene transcription model
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