A macroscopic kinetic model for DNA polymerase elongation and high-fidelity nucleotide selection

DOI10.1016/J.COMPBIOLCHEM.2005.02.003MaRDI QIDQ2500276zbMATH OpenOpenAlexWikidataFDO

Authors S. Viljoen, Mark A. Griep, Michael Nelson, H. J. Viljoen

Publication date 23 August 2006

Published in Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.compbiolchem.2005.02.003

zbMATH Keywords

Biochemical engineeringMichaelis-Menten kineticsMolecular biologyPolymerase chain reaction

Mathematics Subject Classification ID

Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45)

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Cites work

• Principles of rapid polymerase chain reactions: mathematical modeling and experimental verification

Cited in

(7)

• A possible mechanism for the dynamics of transition between polymerase and exonuclease sites in a high-fidelity DNA polymerase
• A model for the dynamics of Mammalian family X DNA polymerases
• Efficient fidelity control by stepwise nucleotide selection in polymerase elongation abstract: polymerases select nucleotides
• A quantitative model of error accumulation during PCR amplification
• A formal language model of DNA polymerase enzymatic activity
• Efficient fidelity control by stepwise nucleotide selection in polymerase elongation
• A minimal model of DNA dynamics in interaction with RNA-polymerase

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