Self-organizing neural networks to support the discovery of DNA-binding motifs

DOI10.1016/J.NEUNET.2006.05.023MaRDI QIDQ2506541zbMATH OpenOpenAlexWikidataFDO

Authors Shaun Mahony, Panayiotis V. Benos, Terry J. Smith, Aaron Golden

Publication date 10 October 2006

Published in Neural Networks (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.neunet.2006.05.023

zbMATH Keywords

self-organizing mapDNA-binding motif identificationself-organizing tree

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05) Nonnumerical algorithms (68W05)

Recommendations

• Supervised Detection of Regulatory Motifs in DNA Sequences
• Detection of over-represented motifs corresponding to known TFBSs via motif clustering and matching
• A transdimensional Bayesian model for pattern recognition in DNA sequences
• Research in Computational Molecular Biology
• scientific article; zbMATH DE number 1931910

Cites work

• scientific article; zbMATH DE number 1694997 (Why is no real title available?)
• Discovery of Conserved Sequence Patterns Using a Stochastic Dictionary Model

Cited in

(1)

• Multilogistic regression by means of evolutionary product-unit neural networks

Describes a project that uses

Uses Software

• TEIRESIAS
• MatInspector
• JASPAR
• TRANSFAC
• BioProspector

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