Statistical considerations underpinning an alignment-free sequence comparison method
DOI10.1016/J.JKSS.2010.02.009zbMATH Open1294.92022OpenAlexW2076678212MaRDI QIDQ2511571FDOQ2511571
Authors: Junmei Jing, Conrad J. Burden, Sylvain Fôret, Susan R. Wilson 
Publication date: 6 August 2014
Published in: Journal of the Korean Statistical Society (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jkss.2010.02.009
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Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20)
Cites Work
- Distributional regimes for the number of k -word matches between two random sequences
- Statistical measures of DNA sequence dissimilarity under Markov chain models of base composition
- A measure of the similarity of sets of sequences not requiring sequence alignment.
- Poisson approximation for dependent trials
- Title not available (Why is that?)
- Compound Poisson approximation: A user's guide
- Statistical methods in bioinformatics. An introduction.
- An overview of recent developments in genomics and associated statistical methods
- Empirical distribution of \(k\)-word matches in biological sequences
- Approximate word matches between two random sequences
- Characterizing the D2 statistic: word matches in biological sequences
- Asymptotic Behavior of k-Word Matches Between two Uniformly Distributed Sequences
Cited In (7)
- Rapid and accurate estimates of statistical significance for sequence data base searches.
- Alignment-free sequence comparison for biologically realistic sequences of moderate length
- Using simple statistics to compare genetic sequences
- On an alternative sequence comparison statistic of Steele
- Empirical distribution of \(k\)-word matches in biological sequences
- New powerful statistics for alignment-free sequence comparison under a pattern transfer model
- A Statistical Method for Comparison of Two Structures and Its Biological Applications
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