An efficient and robust numerical algorithm for estimating parameters in Turing systems

DOI10.1016/j.jcp.2010.05.040zbMath1195.92005OpenAlexW2120030832MaRDI QIDQ2638236

Cǎ tǎ lin Trenchea, Marcus R. Garvie, Philip K. Maini

Publication date: 15 September 2010

Published in: Journal of Computational Physics (Search for Journal in Brave)

Full work available at URL: https://ora.ox.ac.uk/objects/uuid:0d6f5567-5197-4e59-8ac6-4a89cd47ed94

zbMATH Keywords

finite element methodparameter identificationreaction-diffusion equationsoptimal control theorydiffusion-driven instability

Mathematics Subject Classification ID

Applications of optimal control and differential games (49N90) Reaction-diffusion equations (35K57) Computing methodologies and applications (68U99) Developmental biology, pattern formation (92C15) Computational methods for problems pertaining to biology (92-08)

Related Items (22)

Statistical approach for parameter identification by Turing patterns ⋮ Sparse Optimal Control of Pattern Formations for an SIR Reaction-Diffusion Epidemic Model ⋮ Fast solvers for optimal control problems from pattern formation ⋮ Numerical investigation on the role of discrete element method in combined LBM-IBM-DEM modeling ⋮ Unnamed Item ⋮ Preconditioning for PDE-constrained optimization with total variation regularization ⋮ Bespoke Turing systems ⋮ A Bayesian Approach to Modeling Biological Pattern Formation with Limited Data ⋮ Learning system parameters from Turing patterns ⋮ A time independent least squares algorithm for parameter identification of Turing patterns in reaction-diffusion systems ⋮ Parameter estimation for network-organized Turing system based on convolution neural networks ⋮ Data-driven learning of differential equations: combining data and model uncertainty ⋮ Numerical approximation of Turing patterns in electrodeposition by ADI methods ⋮ Some analytical and numerical approaches to understanding trap counts resulting from pest insect immigration ⋮ Bayesian parameter identification for Turing systems on stationary and evolving domains ⋮ Parameter identification through mode isolation for reaction–diffusion systems on arbitrary geometries ⋮ Optimization algorithms for parameter identification in parabolic partial differential equations ⋮ Contact between rigid convex NURBS particles based on computer graphics concepts ⋮ Reduced order optimal control of the convective FitzHugh-Nagumo equations ⋮ Parameter estimation for a morphochemical reaction-diffusion model of electrochemical pattern formation ⋮ Turing instabilities in prey-predator systems with dormancy of predators ⋮ Parameter identification problems in the modelling of cell motility

Uses Software

• KELLEY

Cites Work

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