Entropy production for mechanically or chemically driven biomolecules

DOI10.1007/s10955-006-9148-1zbMath1117.82032arXivcond-mat/0601636WikidataQ59459980 ScholiaQ59459980MaRDI QIDQ2641385

Tim Schmiedl, Udo Seifert, Thomas Speck

Publication date: 20 August 2007

Published in: Journal of Statistical Physics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/cond-mat/0601636

zbMATH Keywords

Brownian motion; thermodynamics; random processes; fluctuation phenomena; biomolecules; chemical kinetics in biological systems

Mathematics Subject Classification ID

92C45: Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.)

92C40: Biochemistry, molecular biology

82C31: Stochastic methods (Fokker-Planck, Langevin, etc.) applied to problems in time-dependent statistical mechanics

82C35: Irreversible thermodynamics, including Onsager-Machlup theory

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Cites Work

• Unnamed Item
• Unnamed Item
• A Gallavotti-Cohen-type symmetry in the large deviation functional for stochastic dynamics
• A Markov model for kinesin
• Microscopic analysis of Clausius-Duhem processes
• Free energy transduction in a chemical motor model
• Fluctuation theorem for stochastic dynamics
• Quantal-Classical Correspondence Impulse Theory
• Brownian motors: noisy transport far from equilibrium