Mathematical and computational methods for studying energy transduction in protein motors

DOI10.1007/S10955-006-9169-9MaRDI QIDQ2641387zbMATH OpenOpenAlexFDO

Authors Hongyun Wang, T. C. Elston

Publication date 20 August 2007

Published in Journal of Statistical Physics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s10955-006-9169-9

zbMATH Keywords

Fokker-Planck equationLangevin equationdetailed balanceeffective diffusionmotor-cargo system

Mathematics Subject Classification ID

Computational methods in Markov chains (60J22) Biochemistry, molecular biology (92C40) Transition functions, generators and resolvents (60J35) Stochastic methods (Fokker-Planck, Langevin, etc.) applied to problems in time-dependent statistical mechanics (82C31) Statistical mechanics of polymers (82D60) Cell biology (92C37)

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Cites work

• scientific article; zbMATH DE number 1161490 (Why is no real title available?)
• A numerical algorithm for investigating the role of the motor-cargo linkage in molecular motor-driven transport
• A robust numerical algorithm for studying biomolecular transport processes
• Brownian motors: noisy transport far from equilibrium
• Protein Flexibility and the Correlation Ratchet
• The Fokker-Planck equation. Methods of solution and applications.
• The Role of Protein Flexibility in Molecular Motor Function: Coupled Diffusion in a Tilted Periodic Potential

Cited in

(11)

• Motor potential profile and a robust method for extracting it from time series of motor positions
• Efficiency of interacting Brownian motors: Improved mean-field treatment
• A homogenization approach for the motion of motor proteins
• Energy conversion by molecular motors coupled to nucleotide hydrolysis
• scientific article; zbMATH DE number 2236716 (Why is no real title available?)
• The mathematical theory of molecular motor movement and chemomechanical energy transduction
• Combined mathematical methods in the description of the F_oF₁-ATP synthase catalytic cycle
• Numerical methods for computing effective transport properties of flashing Brownian motors
• Asymmetric potentials and motor effect: a homogenization approach
• Energy Properties of Protein Structures in the Analysis of the Human RAB5A Cellular Activity
• Asymptotic analysis of microtubule-based transport by multiple identical molecular motors

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