Molecular motors, Brownian ratchets, and reflected diffusions

DOI10.3934/DCDSB.2006.6.711MaRDI QIDQ2471393zbMATH OpenOpenAlexFDO

Authors Amarjit Budhiraja, John Fricks

Publication date 22 February 2008

Published in Discrete and Continuous Dynamical Systems. Series B (Search for Journal in Brave)

Copyright license Creative Commons Attribution 4.0 International

Full work available at URL https://doi.org/10.3934/dcdsb.2006.6.711

zbMATH Keywords

asymptotic velocityflashing ratchetkinesin

Mathematics Subject Classification ID

Central limit and other weak theorems (60F05) Signal detection and filtering (aspects of stochastic processes) (60G35) Brownian motion (60J65) Applications of Brownian motions and diffusion theory (population genetics, absorption problems, etc.) (60J70) Markov processes (60J99) Cell biology (92C37) Biochemistry, molecular biology (92C40) Stochastic stability in control theory (93E15)

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Cited in

(22)

• Asymmetric potentials and motor effect: a homogenization approach
• One- and two-dimensional dynamics of elastically coupled Brownian motors
• A simplified ``ratchet model of molecular motors
• A Brownian ratchet for protein translocation including dissociation of ratcheting sites
• Analytical aspects of the Brownian motor effect in randomly flashing ratchets
• Discrete kinetic models for molecular motors: asymptotic velocity and Gaussian fluctuations
• The mechanochemical stochastic processes of molecular motors
• A Brownian dynamics model of kinesin in three dimensions incorporating the force-extension profile of the coiled-coil cargo tether
• Mathematical and computational methods for studying energy transduction in protein motors
• Asymptotic properties of certain diffusion ratchets with locally negative drift
• DIRECTED MOTION OF BROWNIAN MOTORS: A RATCHET MODEL OF TWO-COUPLED MOLECULAR MOTORS
• DIFFUSION MEDIATED TRANSPORT WITH A LOOK AT MOTOR PROTEINS
• Protein Flexibility and the Correlation Ratchet
• Chromatin remodelers as active Brownian dimers
• Markov modeling of run length and velocity for molecular motors
• Ascending rockets as macroscopic self-propelled Brownian oscillators
• Mathematical modeling of molecular motors
• A homogenization approach to flashing ratchets
• Asymmetric potentials and motor effect: a large deviation approach
• Mechanistic mathematical model of kinesin under time and space fluctuating loads
• Stokes efficiency of molecular motor-cargo systems
• Asymptotics of a Brownian ratchet for protein translocation

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