Brief introduction to self-adapting hidden Markov model program for multiple sequences alignment

DOI10.1007/s11741-001-0002-zzbMath0982.92013MaRDI QIDQ2748697

Dinghua Shi, Yanhong Gu, Yi-Fei Wang

Publication date: 27 February 2002

Published in: Journal of Shanghai University (English Edition) (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s11741-001-0002-z

zbMATH Keywords

hidden Markov model; bioinformatics; profile HMM; multiple sequences alignment

Mathematics Subject Classification ID

60J20: Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.)

92C40: Biochemistry, molecular biology

92D20: Protein sequences, DNA sequences

Uses Software

• ClustalW