Importance of metabolic coupling for the dynamics of gene expression following a diauxic shift in \textit{Escherichia coli}
DOI10.1016/J.JTBI.2011.11.010zbMATH Open1336.92025OpenAlexW2016337236WikidataQ54347222 ScholiaQ54347222MaRDI QIDQ285158FDOQ285158
Authors: Valentina Baldazzi, Delphine Ropers, Johannes Geiselmann, Hidde de Jong, Daniel Kahn
Publication date: 19 May 2016
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2011.11.010
Recommendations
- Dynamic optimization of metabolic networks coupled with gene expression
- Mechanisms of gene regulation: Boolean network models of the lactose operon in \textit{Escherichia coli}
- Dynamic influence of feedback enzyme inhibition and transcription attenuation on the tryptophan operon response to nutritional shifts
- Multistability and oscillations in genetic control of metabolism
- Dynamics of complex feedback architectures in metabolic pathways
Biochemistry, molecular biology (92C40) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45)
Cites Work
- Qualitative simulation of the initiation of sporulation in \textit{Bacillus subtilis}
- Qualitative simulation of genetic regulatory networks using piecewise-linear models
- A methodological basis for description and analysis of systems with complex switch-like interactions
- Comparing different ODE modelling approaches for gene regulatory networks
- The transition from differential equations to Boolean networks: A case study in simplifying a regulatory network model
- Modeling the onset of virulence in a pectinolytic bacterium
- Symbolic reachability analysis of genetic regulatory networks using discrete abstractions
- Qualitative dynamics of piecewise-linear differential equations: a discrete mapping approach
- Title not available (Why is that?)
- Dynamics in high-dimensional model gene networks
Cited In (6)
- An integrated model of glucose and galactose metabolism regulated by the GAL genetic switch
- Network analysis of common differential genes identifies key genes and important modules underlying extracellular electron transfer processes
- Qualitative Behavior of a Metabolic Pathway with Hybrid Feedback
- Dynamic optimization of metabolic networks coupled with gene expression
- Dynamics of complex feedback architectures in metabolic pathways
- Modelling and analysis of a gene-regulatory feed-forward loop with basal expression of the second regulator
Uses Software
This page was built for publication: Importance of metabolic coupling for the dynamics of gene expression following a diauxic shift in \textit{Escherichia coli}
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q285158)