Network‐Based Penalized Regression With Application to Genomic Data

DOI10.1111/biom.12035zbMath1429.62294WikidataQ30652883 ScholiaQ30652883MaRDI QIDQ2861942

Xiaotong Shen, Wei Pan, Sunkyung Kim

Publication date: 13 November 2013

Published in: Biometrics (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc4007772

zbMATH Keywords

nonconvex minimization; gene expression; penalty; networks analysis; truncated Lasso penalty

Mathematics Subject Classification ID

62J07: Ridge regression; shrinkage estimators (Lasso)

62J05: Linear regression; mixed models

62P10: Applications of statistics to biology and medical sciences; meta analysis

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Uses Software

• CVX
• KEGG

Cites Work

• Unnamed Item
• Variable selection and regression analysis for graph-structured covariates with an application to genomics
• Structured, sparse regression with application to HIV drug resistance
• The composite absolute penalties family for grouped and hierarchical variable selection
• Least angle regression. (With discussion)
• Incorporating Predictor Network in Penalized Regression with Application to Microarray Data
• Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties
• Sparsity and Smoothness Via the Fused Lasso
• Likelihood-Based Selection and Sharp Parameter Estimation
• Grouping Pursuit Through a Regularization Solution Surface
• Bayesian Variable Selection in Structured High-Dimensional Covariate Spaces With Applications in Genomics
• Regularization and Variable Selection Via the Elastic Net
• Model Selection and Estimation in Regression with Grouped Variables
• Simultaneous Regression Shrinkage, Variable Selection, and Supervised Clustering of Predictors with OSCAR