Linear time inference of strings from cover arrays using a binary alphabet (extended abstract)

DOI10.1007/978-3-642-28076-4_17MaRDI QIDQ2889909zbMATHOpenAlexFDO

Authors Tanaeem M. Moosa, Sumaiya Nazeen, M. Sohel Rahman, Rezwana Reaz

Publication date 8 June 2012

Published in WALCOM: Algorithms and Computation (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/1108.5422

Mathematics Subject Classification ID

Algorithms on strings (68W32)

Abstract: Covers being one of the most popular form of regularities in strings, have drawn much attention over time. In this paper, we focus on the problem of linear time inference of strings from cover arrays using the least sized alphabet possible. We present an algorithm that can reconstruct a string $x$ over a two-letter alphabet whenever a valid cover array $C$ is given as an input. This algorithm uses several interesting combinatorial properties of cover arrays and an interesting relation between border array and cover array to achieve this. Our algorithm runs in linear time.

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(5)

• Cover array string reconstruction
• Inferring strings from cover arrays
• Mathematical Foundations of Computer Science 2003
• Universal reconstruction of a string
• Inferring an indeterminate string from a prefix graph

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