Learning quantitative sequence-function relationships from massively parallel experiments

DOI10.1007/S10955-015-1398-3zbMath1337.92157arXiv1506.00054OpenAlexW1962652794WikidataQ59479225 ScholiaQ59479225MaRDI QIDQ290475

Gurinder S. Atwal, Justin B. Kinney

Publication date: 1 June 2016

Published in: Journal of Statistical Physics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1506.00054

zbMATH Keywords

likelihoodmutual informationdiffeomorphic modessequence-function relationshipsSort-Seq

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) General biostatistics (92B15) Protein sequences, DNA sequences (92D20) Computational methods for problems pertaining to biology (92-08)

Cites Work

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• Equitability, mutual information, and the maximal information coefficient
• Field Theories for Learning Probability Distributions
• Analyzing Neural Responses to Natural Signals: Maximally Informative Dimensions
• Learning Quadratic Receptive Fields from Neural Responses to Natural Stimuli
• Parametric Inference in the Large Data Limit Using Maximally Informative Models

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