Incorporation of flexible objectives and time-linked simulation with flux balance analysis

DOI10.1016/J.JTBI.2013.12.009zbMATH Open1338.92039OpenAlexW2109563298WikidataQ41976274 ScholiaQ41976274MaRDI QIDQ291587FDOQ291587

Authors: Elsa W. Birch, Madeleine Udell, Markus W. Covert 

Publication date: 10 June 2016

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2013.12.009

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zbMATH Keywords

integrated modelingmetabolism

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

Cites Work

• Title not available (Why is that?)

Cited In (3)

• Discretised flux balance analysis for reaction-diffusion simulation of single-cell metabolism
• Dynamic flux balance analysis with nonlinear objective function
• An energetic reformulation of kinetic rate laws enables scalable parameter estimation for biochemical networks

Uses Software

• CVXOPT

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