Influence of the feedback loops in the \textit{trp} operon of \textit{B. subtilis} on the system dynamic response and noise amplitude

DOI10.1016/J.JTBI.2012.06.014MaRDI QIDQ292763zbMATH OpenOpenAlexWikidataFDO

Authors Criseida Zamora-Chimal, Moisés Santillán, Jesús Rodríguez-González

Publication date 9 June 2016

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2012.06.014

zbMATH Keywords

homeostasismultiplicity of regulatory mechanismsregulatory feedback loopstochastic gene expressiontime-delay differential equations

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

Recommendations

• The effect of negative feedback on noise propagation in transcriptional gene networks
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Cites work

• Cycling expression and cooperative operator interaction in the \(trp\) operon of \textit{Escherichia coli}
• Distributions for negative-feedback-regulated stochastic gene expression: dimension reduction and numerical solution of the chemical master equation
• Dynamic influence of feedback enzyme inhibition and transcription attenuation on the tryptophan operon response to nutritional shifts
• Multiscale stochastic simulation algorithm with stochastic partial equilibrium assumption for chemically reacting systems
• On the use of the Hill functions in mathematical models of gene regulatory networks

Cited in

(8)

• scientific article; zbMATH DE number 2050734 (Why is no real title available?)
• Optimal performance of the tryptophan operon of \textit{E. coli}: a stochastic, dynamical, mathematical-modeling approach
• Cycling expression and cooperative operator interaction in the \(trp\) operon of \textit{Escherichia coli}
• Modeling feedback loops in the H-NS-mediated regulation of the \textit{Escherichia coli bgl} operon
• Dynamic influence of feedback enzyme inhibition and transcription attenuation on the tryptophan operon response to nutritional shifts
• Global behaviors analysis for tryptophan operon system with bounded noise
• Analytical study of the multiplicity of regulatory mechanisms in the tryptophan operon
• CHARACTERIZATION OF INTRINSIC AND EXTRINSIC NOISE EFFECTS IN POSITIVELY REGULATED GENES

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