Detecting Genomic Aberrations Using Products in a Multiscale Analysis

DOI10.1111/j.1541-0420.2009.01337.xzbMath1203.62209WikidataQ42059778 ScholiaQ42059778MaRDI QIDQ3064252

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Publication date: 21 December 2010

Published in: Biometrics (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc2942992

zbMATH Keywords

wavelet; \(p\)-value; multiple comparison; change point; copy number variation; array-based comparative genomic hybridization; multiscale product

Mathematics Subject Classification ID

62G10: Nonparametric hypothesis testing

62P10: Applications of statistics to biology and medical sciences; meta analysis

62L10: Sequential statistical analysis

92D10: Genetics and epigenetics

62N03: Testing in survival analysis and censored data

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Cites Work

• Unnamed Item
• Resampling-based multiple testing for microarray data analysis (With comments)
• Hidden Markov models approach to the analysis of array CGH data
• Stochastic segmentation models for array-based comparative genomic hybridization data analysis
• Bayesian Hidden Markov Modeling of Array CGH Data
• Spatial smoothing and hot spot detection for CGH data using the fused lasso
• Robust Locally Weighted Regression and Smoothing Scatterplots
• Analysis of multiscale products for step detection and estimation
• Circular binary segmentation for the analysis of array-based DNA copy number data
• A method for calling gains and losses in array CGH data
• A Modified Bayes Information Criterion with Applications to the Analysis of Comparative Genomic Hybridization Data
• A Segmentation/Clustering Model for the Analysis of Array CGH Data
• Denoising array-based comparative genomic hybridization data using wavelets