Bayesian Hidden Markov Modeling of Array CGH Data
From MaRDI portal
Publication:3632657
DOI10.1198/016214507000000923zbMath1469.62368OpenAlexW2134012290WikidataQ34178052 ScholiaQ34178052MaRDI QIDQ3632657
Yi Li, Donna Neuberg, Subharup Guha
Publication date: 12 June 2009
Published in: Journal of the American Statistical Association (Search for Journal in Brave)
Full work available at URL: https://biostats.bepress.com/cgi/viewcontent.cgi?article=1024&context=harvardbiostat
Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15) Markov processes: estimation; hidden Markov models (62M05)
Related Items (22)
Vladimir Steklov: a mathematician at the turn of the era ⋮ A semiparametric Bayesian model for comparing DNA copy numbers ⋮ A heuristic, iterative algorithm for change-point detection in abrupt change models ⋮ MAP segmentation in Bayesian hidden Markov models: a case study ⋮ Modeling the next generation sequencing read count data for DNA copy number variant study ⋮ Bayesian–frequentist hybrid model with application to the analysis of gene copy number changes ⋮ A Bayesian approach to inference about a change point model with application to DNA copy number experimental data ⋮ A hierarchical Bayesian model for inference of copy number variants and their association to gene expression ⋮ A continuous-index hidden Markov jump process for modeling DNA copy number data ⋮ Identification of Differential Aberrations in Multiple-Sample Array CGH Studies ⋮ Bayesian hidden Markov models to identify RNA–protein interaction sites in PAR‐CLIP ⋮ Hidden Markov models for the assessment of chromosomal alterations using high-throughput SNP arrays ⋮ Segmentation and Estimation for SNP Microarrays: A Bayesian Multiple Change-Point Approach ⋮ Detecting Genomic Aberrations Using Products in a Multiscale Analysis ⋮ Species Sampling Priors for Modeling Dependence: An Application to the Detection of Chromosomal Aberrations ⋮ Exact inference for a class of hidden Markov models on general state spaces ⋮ MCMC implementation for Bayesian hidden semi-Markov models with illustrative applications ⋮ HmmSeq: a hidden Markov model for detecting differentially expressed genes from RNA-seq data ⋮ Generalized Species Sampling Priors With Latent Beta Reinforcements ⋮ Sequential model selection-based segmentation to detect DNA copy number variation ⋮ An online copy number variant detection method for short sequencing reads ⋮ A Latent Class Model with Hidden Markov Dependence for Array CGH Data
This page was built for publication: Bayesian Hidden Markov Modeling of Array CGH Data