Bayesian hidden Markov models to identify RNA–protein interaction sites in PAR‐CLIP
DOI10.1111/biom.12147zbMath1419.62486OpenAlexW2110428330WikidataQ40815627 ScholiaQ40815627MaRDI QIDQ5170214
Guanghua Xiao, Tao Wang, Jonghyun Yun
Publication date: 22 July 2014
Published in: Biometrics (Search for Journal in Brave)
Full work available at URL: http://europepmc.org/articles/pmc4061157
Markov chain Monte Carlonext generation sequencing datanon-homogeneous hidden Markov modelbeta geometricPAR-CLIPRNA binding protein
Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15) Markov processes: estimation; hidden Markov models (62M05) Protein sequences, DNA sequences (92D20)
Uses Software
Cites Work
- Unnamed Item
- Unnamed Item
- One mixed negative binomial distribution with application
- Inference from iterative simulation using multiple sequences
- A fully Bayesian hidden Ising model for ChIP-seq data analysis
- Bayesian Modeling of ChIP-chip Data Through a High-Order Ising Model
- Bayesian Hidden Markov Modeling of Array CGH Data
- Bayesian Methods for Hidden Markov Models
- Zero‐Inflated Poisson and Binomial Regression with Random Effects: A Case Study
- Mixture Modeling for Genome‐Wide Localization of Transcription Factors
- Error bounds for convolutional codes and an asymptotically optimum decoding algorithm
- Detecting differential gene expression with a semiparametric hierarchical mixture method
- A Bayesian Hidden Markov Model for Motif Discovery Through Joint Modeling of Genomic Sequence and ChIP‐Chip Data
This page was built for publication: Bayesian hidden Markov models to identify RNA–protein interaction sites in PAR‐CLIP