Cited in
(only showing first 100 items - show all)- A model selection criterion for model-based clustering of annotated gene expression data
- Homology cluster differential expression analysis for interspecies mRNA-seq experiments
- A Bayesian mixture model for chromatin interaction data
- Bayesian hidden Markov models to identify RNA-protein interaction sites in PAR-CLIP
- Statistical calibration of qRT-PCR, microarray and RNA-Seq gene expression data with measurement error models
- Controlling the false-discovery rate by procedures adapted to the length bias of RNA-seq
- On computing maximum likelihood estimates for the negative binomial distribution
- A semi-parametric Bayesian approach for detection of gene expression heterosis with RNA-seq data
- A statistical method for detecting differentially expressed SNVs based on next-generation RNA-seq data
- Identifying atypically expressed chromosome regions using RNA-Seq data
- Kinetic Foundation of the Zero-Inflated Negative Binomial Model for Single-Cell RNA Sequencing Data
- Tropical sufficient statistics for persistent homology
- A bioequivalence test by the direct comparison of concentration-versus-time curves using local polynomial smoothers
- Significance tests to identify regulated proteins based on a large number of small samples
- Estimation of sparse directed acyclic graphs for multivariate counts data
- Inference of large modified Poisson-type graphical models: application to RNA-seq data in childhood atopic asthma studies
- A finite mixture approach to joint clustering of individuals and multivariate discrete outcomes
- \(p\)-value calibration for multiple testing problems in genomics
- A Markov random field-based approach for joint estimation of differentially expressed genes in mouse transcriptome data
- What if we ignore the random effects when analyzing RNA-seq data in a multifactor experiment
- Fully Bayesian analysis of allele-specific RNA-seq data
- Two-sample test for sparse high-dimensional multinomial distributions
- scientific article; zbMATH DE number 7370572 (Why is no real title available?)
- A two-stage Poisson model for testing RNA-Seq data
- Shrinkage of dispersion parameters in the binomial family, with application to differential exon skipping
- Detecting rare and faint signals via thresholding maximum likelihood estimators
- Network modeling in biology: statistical methods for gene and brain networks
- Empirical likelihood tests for nonparametric detection of differential expression from RNA-seq data
- Modeling read counts for CNV detection in exome sequencing data
- The NBP negative binomial model for assessing differential gene expression from RNA-Seq
- Bioconductor
- gcrma
- vsn
- edgeR
- SAM
- EDGE
- DEGseq
- RankProd
- MAANOVA
- casper
- corpor
- BaySeq
- EDAseq
- limma
- RUVseq
- BioHMM
- lpc
- QuasiSeq
- MDM
- Netsim
- ShrinkBayes
- SPECTRODE
- Diffcorr
- svaseq
- Voom
- ShortRead
- HTSeq
- Galaxy
- DiffSplice
- DoubleExpSeq
- EBSeq
- Enrichr
- LAS
- featureCounts
- RSEM
- NBC
- PROPER
- recount
- bc3net
- TopHat
- DGCA
- performance
- zCompositions
- UpSetR
- A parametric model fitting time to first event for overdispersed data: application to time to relapse in multiple sclerosis
- CNV-seq
- GENE-counter
- Scotty
- EmpDiff
- diffHic
- BiGGEsTS
- TFisher
- compcodeR
- DEXUS
- MAPPFinder
- SC3
- Sincera
- structSSI
- trimAl
- DNA
- MetamicrobiomeR
- DNMAD
- FunCoup
- MATHT
- miTarget
- Condor
- ePCA
- rSeqDiff
- TopHat-Fusion
- RNASeqR
This page was built for software: DEseq
