A two-stage Poisson model for testing RNA-Seq data
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Publication:458254
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Cited in
(22)- Statistical modeling of RNA-Seq data
- Large scale maximum average power multiple inference on time-course count data with application to RNA-seq analysis
- A semi-parametric Bayesian approach for differential expression analysis of RNA-seq data
- HmmSeq: a hidden Markov model for detecting differentially expressed genes from RNA-seq data
- Modeling overdispersion heterogeneity in differential expression analysis using mixtures
- Pathway analysis for RNA-seq data using a score-based approach
- Classification and clustering of sequencing data using a Poisson model
- An optimal test with maximum average power while controlling FDR with application to RNA-seq data
- No counts, no variance: allowing for loss of degrees of freedom when assessing biological variability from RNA-seq data
- Inference of large modified Poisson-type graphical models: application to RNA-seq data in childhood atopic asthma studies
- A flexible model for correlated count data, with application to multicondition differential expression analyses of single-cell RNA sequencing data
- Detecting differential expression in RNA-sequence data using quasi-likelihood with shrunken dispersion estimates
- Dynamic linear model for the identification of miRNAs in next-generation sequencing data
- Identifying atypically expressed chromosome regions using RNA-Seq data
- A comparison study on modeling of clustered and overdispersed count data for multiple comparisons
- What if we ignore the random effects when analyzing RNA-seq data in a multifactor experiment
- Simultaneous inference of gene isoform expression for RNA sequencing data
- SimBPDD: Simulating differential distributions in Beta-Poisson models, in particular for single-cell RNA sequencing data
- RNA Pol II transcription model and interpretation of GRO-seq data
- Modifying SAMseq to account for asymmetry in the distribution of effect sizes when identifying differentially expressed genes
- Empirical Bayes analysis of RNA sequencing experiments with auxiliary information
- Contrastive latent variable modeling with application to case-control sequencing experiments
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