Homology cluster differential expression analysis for interspecies mRNA-seq experiments

DOI10.1515/SAGMB-2014-0056MaRDI QIDQ5962701zbMATH OpenOpenAlexWikidataFDO

Authors Jonathan A. Gelfond, Joseph G. Ibrahim, Ming-Hui Chen, Wei Sun, Kaitlyn Lewis, Sean Kinahan, Matthew Hibbs, Rochelle Buffenstein

Publication date 16 February 2016

Published in Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1515/sagmb-2014-0056

zbMATH Keywords

homologyRNAtranscriptome

Mathematics Subject Classification ID

Parametric hypothesis testing (62F03) Asymptotic properties of parametric tests (62F05) General biostatistics (92B15) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20)

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Cited in

(1)

• Inferring clusters of orthologous and paralogous transcripts

Describes a project that uses

Uses Software

• Enrichr
• RSEM
• DEseq
• Bioconductor
• R

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