Markov and semi-Markov switching linear mixed models used to identify forest tree growth components

DOI10.1111/J.1541-0420.2009.01338.XzbMATH Open1203.62211OpenAlexW1966557777WikidataQ51138702 ScholiaQ51138702MaRDI QIDQ3064263FDOQ3064263

Authors Florence Chaubert-Pereira, Yann Guédon, Christian Lavergne, C. Trottier 

Publication date 21 December 2010

Published in Biometrics (Search for Journal in Brave)

Full work available at URL https://hal.inria.fr/inria-00488100/file/chaubert10_SMS_LMM_Biometrics_revision3.pdf

zbMATH Keywords

plant structure analysisMCEM algorithmMarkov switching modelindividual random effectsemi-Markov switching model

Mathematics Subject Classification ID

Markov processes: estimation; hidden Markov models (62M05) Monte Carlo methods (65C05) Applications of statistics to environmental and related topics (62P12) Ecology (92D40) Plant biology (92C80)

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Cites Work

• Ascent-Based Monte Carlo Expectation– Maximization
• Calculating posterior distributions and modal estimates in Markov mixture models
• Estimation of parameters in hidden Markov models
• Exploring the state sequence space for hidden Markov and semi-Markov chains
• Hidden Markov processes
• Latent Variable Models with Mixed Continuous and Polytomous Data
• Maximum Likelihood Algorithms for Generalized Linear Mixed Models
• Maximum Likelihood Variance Components Estimation for Binary Data
• Mixed Hidden Markov Models
• Mixture of linear mixed models for clustering gene expression profiles from repeated microarray experiments
• Segmental hidden Markov models with random effects for waveform modeling
• Some Bayesian and Non-Bayesian Procedures for the Analysis of Comparative Experiments and for Small-Area Estimation: Computational Aspects, Frequentist Properties, and Relationships
• The EM Algorithm and Extensions, 2E

Cited In (10)

• Analyzing growth components in trees
• Analysis of growth of abies nordmanniana subs. Nordmanniana by Markov chain model
• Maximum likelihood estimation in discrete mixed hidden Markov models using the SAEM algorithm
• A Bayesian model for presence-only semicontinuous data, with application to~prediction of abundance of \textit{Taxus Baccata} in two Italian regions
• Generalized linear mixed hidden models in longitudinal settings: a Bayesian approach
• Gaussian quadrature approximations in mixed hidden Markov models for longitudinal data: a simulation study
• Multivariate Multilevel Nonlinear Mixed Effects Models for Timber Yield Predictions
• A Bayesian HMM with random effects and an unknown number of states for DNA copy number analysis
• Hidden semi-Markov models
• Hidden Markov models with arbitrary state dwell-time distributions

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