A Bayesian HMM with random effects and an unknown number of states for DNA copy number analysis

DOI10.1080/00949655.2011.609818zbMath1348.92065MaRDI QIDQ4922611

Ramon Diaz-Uriarte, Oscar M. Rueda, Cristina Rueda

Publication date: 3 June 2013

Published in: Journal of Statistical Computation and Simulation (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1080/00949655.2011.609818

zbMATH Keywords

hidden Markov models; Bayesian inference; copy number variation; array comparative genomic hybridization; reversible-jump Markov chain Monte Carlo

Mathematics Subject Classification ID

60J22: Computational methods in Markov chains

62P10: Applications of statistics to biology and medical sciences; meta analysis

62F15: Bayesian inference

92C40: Biochemistry, molecular biology

Uses Software

• BioHMM

Cites Work

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