A commentary on some recent methods in sibling group reconstruction based on set coverings

DOI10.1080/10556788.2011.578249MaRDI QIDQ3096891zbMATH OpenOpenAlexFDO

Authors Anthony Almudevar

Publication date 15 November 2011

Published in Optimization Methods \& Software (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1080/10556788.2011.578249

zbMATH Keywords

geneticscombinatorial optimizationcomputational biology

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Combinatorial optimization (90C27) Computational methods for problems pertaining to biology (92-08)

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Cites work

• scientific article; zbMATH DE number 1219584 (Why is no real title available?)
• On constructing an optimal consensus clustering from multiple clusterings
• Partition-distance: A problem and class of perfect graphs arising in clustering
• Set covering approach for reconstruction of sibling relationships

Cited in

(6)

• The relationship between single parent and parent pair genetic likelihoods in genealogy reconstruction
• Set covering approach for reconstruction of sibling relationships
• A bootstrap assessment of variability in pedigree reconstruction based on genetic markers
• Phenotype space and kinship assignment for the simpson index
• New optimization model and algorithm for sibling reconstruction from genetic markers
• Column-generation framework of nonlinear similarity model for reconstructing sibling groups

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