Reconstruction of pedigrees in clonal plant populations

DOI10.1016/j.tpb.2010.05.002zbMath1338.92090OpenAlexW2093096052WikidataQ42664835 ScholiaQ42664835MaRDI QIDQ5890790

Konstantin Klemm, Markus Riester, Peter F. Stadler

Publication date: 22 June 2016

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tpb.2010.05.002

zbMATH Keywords

pedigreeMCMCSNPclonalmicrosatelliteparentageselfing

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15) Problems related to evolution (92D15) Genetics and epigenetics (92D10)

Related Items

On the choice of prior density for the Bayesian analysis of pedigree structure

Uses Software

• FaMoz
• PARENTE
• GENEPOP
• Cervus
• FRANz

Cites Work

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• A simulated annealing algorithm for maximum likelihood pedigree reconstruction
• A graphical approach to relatedness inference
• A Markov chain Monte Carlo strategy for sampling from the joint posterior distribution of pedigrees and population parameters under a Fisher-Wright model with partial selfing
• The relationship between single parent and parent pair genetic likelihoods in genealogy reconstruction
• Efficient maximum likelihood pedigree reconstruction
• On the Irreducibility of a Markov Chain Defined on a Space of Genotype Configurations by a Sampling Scheme