scientific article; zbMATH DE number 437562

MaRDI QIDQ3140441zbMATH OpenFDO

Authors Farid Alizadeh, L. Newberg, D. K. Weisser, Richard Karp

Publication date 2 January 1994

zbMATH Keywords

algorithmsclone librarycloningDNA moleculehybridization datalattice pathsnoiseless casereassemblystochastic model

Mathematics Subject Classification ID

Combinatorics in computer science (68R05) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20)

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• Probe location in the presence of errors: A problem from DNA mapping
• Partitioning single-molecule maps into multiple populations: Algorithms and probabilistic analysis
• The restriction mapping problem revisited.
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• The complexity of gene placement
• Combinatorics of chromosomal rearrangements based on synteny blocks and synteny packs
• Molecular solutions for double and partial digest problems in polynomial time
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• ON FINDING TOPOLOGICALLY VALID MATCHINGS IN RESTRICTION-FRAGMENT MAPS
• Constraint Databases
• Rearrangement of DNA fragments: a branch-and-cut algorithm.
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• The expected fraction of clonable genomic DNA
• Partial digest is hard to solve for erroneous input data
• On cloning and clone libraries for finite and infinite length genomes

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