Inferring the time-invariant topology of a nonlinear sparse gene regulatory network using fully Bayesian spline autoregression

DOI10.1093/biostatistics/kxr009zbMath1314.62244OpenAlexW2160668760WikidataQ48137592 ScholiaQ48137592MaRDI QIDQ3165538

Katherine J. Denby, Miguel A. Juárez, Edward R. Morrissey, Nigel J. Burroughs

Publication date: 29 October 2012

Published in: Biostatistics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1093/biostatistics/kxr009

zbMATH Keywords

circadian clockGibbs variable selectiontime course gene expression data\(P\)-splines regressionMarkov process priornonlinear gene regulatory networks

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10)

Related Items (7)

Gaussian graphical modeling for spectrometric data analysis ⋮ Bayesian smooth‐and‐match inference for ordinary differential equations models linear in the parameters ⋮ Autoregressive models for gene regulatory network inference: sparsity, stability and causality issues ⋮ Statistical inference of regulatory networks for circadian regulation ⋮ Inference of gene regulatory networks using Bayesian nonparametric regression and topology information ⋮ Bayesian nonlinear model selection for gene regulatory networks ⋮ Inferring bi-directional interactions between circadian clock genes and metabolism with model ensembles

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