Statistical inference of regulatory networks for circadian regulation
DOI10.1515/SAGMB-2013-0051zbMATH Open1296.92011OpenAlexW1558471429WikidataQ45957011 ScholiaQ45957011MaRDI QIDQ461673FDOQ461673
Authors: Andrej Aderhold, Dirk Husmeier, Marco Grzegorczyk 
Publication date: 13 October 2014
Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)
Full work available at URL: http://eprints.gla.ac.uk/95697/1/95697.pdf
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ANOVAhierarchical Bayesian modelscircadian clockcomparative method evaluationregulatory network inference
Cites Work
- Bio-PEPA: A framework for the modelling and analysis of biological systems
- The elements of statistical learning. Data mining, inference, and prediction
- Inference from iterative simulation using multiple sequences
- Title not available (Why is that?)
- Gaussian processes for machine learning.
- Regularization and Variable Selection Via the Elastic Net
- Pattern recognition and machine learning.
- Nonparametric regression using Bayesian variable selection
- Sparse inverse covariance estimation with the graphical lasso
- Machine learning. A probabilistic perspective
- Title not available (Why is that?)
- 10.1162/15324430152748236
- A non-homogeneous dynamic Bayesian network with sequentially coupled interaction parameters for applications in systems and synthetic biology
- Regularization of non-homogeneous dynamic Bayesian networks with global information-coupling based on hierarchical Bayesian models
- Accurate Ranking of Differentially Expressed Genes by a Distribution-Free Shrinkage Approach
- Data analysis. With statistical methods and computer programs. With CD-ROM.
- Title not available (Why is that?)
- Learning and inference in computational systems biology.
- Inferring the time-invariant topology of a nonlinear sparse gene regulatory network using fully Bayesian spline autoregression
Cited In (10)
- Inferring bi-directional interactions between circadian clock genes and metabolism with model ensembles
- Time series adjustment enhancement of hierarchical modeling of \textit{Arabidopsis thaliana} gene interactions
- Combining gene expression data and prior knowledge for inferring gene regulatory networks via Bayesian networks using structural restrictions
- Targeting Bayes factors with direct-path non-equilibrium thermodynamic integration
- Latent Variable Poisson Models for Assessing the Regularity of Circadian Patterns over Time
- Bayesian inference and optimisation of stochastic dynamical networks
- Approximate Bayesian inference in semi-mechanistic models
- Model selection for factorial Gaussian graphical models with an application to dynamic regulatory networks
- Estimating causal effects from nonparanormal observational data
- A sparse hierarchical Bayesian model for detecting relevant antigenic sites in virus evolution
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