Time series adjustment enhancement of hierarchical modeling of \textit{Arabidopsis thaliana} gene interactions

DOI10.1007/978-3-030-42266-0_11MaRDI QIDQ5041145zbMATH OpenOpenAlexFDO

Authors John Farrell, Alexandria F. Harkey, David John, Gloria Muday, James L. Norris III, Bo Wu, Edward E. Allen

Publication date 13 October 2022

Published in Algorithms for Computational Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-030-42266-0_11

zbMATH Keywords

Bayesian methodsbioinformaticsgene interaction network modelinggenetic algorithmstime series adjustment

Mathematics Subject Classification ID

Evolutionary algorithms, genetic algorithms (computational aspects) (68W50) Computational methods for problems pertaining to biology (92-08) Systems biology, networks (92C42) Genetics and epigenetics (92D10)

Recommendations

• scientific article; zbMATH DE number 1950552
• Reverse engineering gene regulatory networks using approximate Bayesian computation
• Inferring the time-invariant topology of a nonlinear sparse gene regulatory network using fully Bayesian spline autoregression
• Statistical inference of regulatory networks for circadian regulation
• A non-homogeneous dynamic Bayesian network with sequentially coupled interaction parameters for applications in systems and synthetic biology

Cites work

• A survey of statistical methods for gene-gene interaction in case-control genome-wide association studies
• Bayesian model averaging: A tutorial. (with comments and a rejoinder).
• Evolutionary computation. 1. Basic algorithms and operators
• scientific article; zbMATH DE number 1808197 (Why is no real title available?)
• scientific article; zbMATH DE number 1131224 (Why is no real title available?)

Describes a project that uses

Uses Software

• NetworkX

This page was built for publication: Time series adjustment enhancement of hierarchical modeling of \textit{Arabidopsis thaliana} gene interactions

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5041145)