Transition Path Theory for Markov Jump Processes
From MaRDI portal
Publication:3182789
Recommendations
Cited in
(58)- Point cloud discretization of Fokker-Planck operators for committor functions
- Transition Path Theory
- Generative methods for sampling transition paths in molecular dynamics
- Adaptive Importance Sampling Based on Fault Tree Analysis for Piecewise Deterministic Markov Process
- On stochastic formalisms in transition state theory
- Transition-path theory calculations on non-uniform meshes in two and three dimensions using finite elements
- Metastability of reversible random walks in potential fields
- Data-driven efficient solvers for Langevin dynamics on manifold in high dimensions
- On the Validity of the Markov Interpretation of Path Diagrams of Gaussian Structural Equations Systems with Correlated Errors
- SPECTRWM: Spectral Random Walk Method for the Numerical Solution of Stochastic Partial Differential Equations
- A convergent discretization method for transition path theory for diffusion processes
- Coupling rare event algorithms with data-based learned committor functions using the analogue Markov chain
- Flows in complex networks: theory, algorithms, and application to lennard-Jones cluster rearrangement
- Revisit of macroscopic dynamics for some non-equilibrium chemical reactions from a Hamiltonian viewpoint
- Multistable systems with moderate noise: Coarse-graining to a Markovian jump process and evaluation of the transition rates
- Transition manifolds of complex metastable systems. Theory and data-driven computation of effective dynamics
- Optimal Reaction Coordinates: Variational Characterization and Sparse Computation
- Local and global perspectives on diffusion maps in the analysis of molecular systems
- A mathematical framework for exact milestoning
- On the optimal importance process for piecewise deterministic Markov process
- Constructing the equilibrium ensemble of folding pathways from short off-equilibrium simulations
- Statistical analysis of the first passage path ensemble of jump processes
- Explore stochastic instabilities of periodic points by transition path theory
- Sticky Brownian Motion and Its Numerical Solution
- Efficient computation, sensitivity, and error analysis of committor probabilities for complex dynamical processes
- Overcoming the timescale barrier in molecular dynamics: Transfer operators, variational principles and machine learning
- A mathematical theory of optimal milestoning (with a detour via exact milestoning)
- Markovian bridges and reversible diffusion processes with jumps
- Transition Path Theory for Langevin Dynamics on Manifolds: Optimal Control and Data-Driven Solver
- A probabilistic decomposition-synthesis method for the quantification of rare events due to internal instabilities
- A graph-algorithmic approach for the study of metastability in Markov chains
- Continuous-time random walks for the numerical solution of stochastic differential equations
- Metastability of the two-dimensional Blume-Capel model with zero chemical potential and small magnetic field
- Collapse of transitional wall turbulence captured using a rare events algorithm
- Analysis and optimization of weighted ensemble sampling
- Metastable behavior in Markov processes with internal states
- Markov model theory
- Computational identification of irreducible state-spaces for stochastic reaction networks
- Macrophage phenotype transitions in a stochastic gene-regulatory network model
- Estimation of reactive fluxes in gradient stochastic systems using an analogy with electric circuits
- Modularity revisited: a novel dynamics-based concept for decomposing complex networks
- A probabilistic framework for particle-based reaction-diffusion dynamics using classical Fock space representations
- Metastable Markov chains
- Mathematical modeling of spatio-temporal population dynamics and application to epidemic spreading
- Extending transition path theory: periodically driven and finite-time dynamics
- Hamilton Dynamics in Chemical Reactions: the Maupertuis Principle, Transition Paths and Energy Landscape
- Modularity of directed networks: cycle decomposition approach
- Reactive trajectories and the transition path process
- scientific article; zbMATH DE number 3982214 (Why is no real title available?)
- Computing committors in collective variables via Mahalanobis diffusion maps
- Transitions States of Stochastic Chemical Kinetic Systems
- Computing Freidlin's cycles for the overdamped Langevin dynamics. Application to the Lennard-Jones-38 cluster
- Towards a theory of transition paths
- Finding dominant structures of nonreversible Markov processes
- The Gibbs principle for Markov jump processes
- An efficient jet marcher for computing the quasipotential for 2D SDEs. Enhancing accuracy and efficiency of quasipotential solvers
- scientific article; zbMATH DE number 5689010 (Why is no real title available?)
- Identifying transition states of chemical kinetic systems using network embedding techniques
This page was built for publication: Transition Path Theory for Markov Jump Processes
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3182789)
