Incorporating Genotype Uncertainty into Mark-Recapture-Type Models For Estimating Abundance Using DNA Samples

DOI10.1111/j.1541-0420.2008.01165.xzbMath1172.62067OpenAlexW2031382613WikidataQ51853763 ScholiaQ51853763MaRDI QIDQ3183230

Alain C. Frantz, Dianne M. Gleeson, Richard J. Barker, Janine A. Wright, Matthew R. Schofield, Andrea E. Byrom

Publication date: 19 October 2009

Published in: Biometrics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1111/j.1541-0420.2008.01165.x

zbMATH Keywords

Markov chain Monte CarloBayesian inferencemicrosatellitepopulation estimationmark recaptureallelic dropoutnoninvasive genetic sampling

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15) Numerical analysis or methods applied to Markov chains (65C40) Genetics and epigenetics (92D10)

Related Items (18)

Some applications of genetics in statistical ecology ⋮ Extending the latent multinomial model with complex error processes and dynamic Markov bases ⋮ Spatial capture-recapture with partial identity: an application to camera traps ⋮ Closed‐population capture–recapture modeling of samples drawn one at a time ⋮ Maximum likelihood estimation for model M_t,α for capture–recapture data with misidentification ⋮ Improving wildlife population inference using aerial imagery and entity resolution ⋮ Wildlife population assessment: changing priorities driven by technological advances ⋮ Weighted likelihood recapture estimation of detection probabilities from an ice‐based survey of bowhead whales ⋮ A hierarchical Bayesian approach to record linkage and population size problems ⋮ Uncovering a Latent Multinomial: Analysis of Mark-Recapture Data with Misidentification ⋮ Probit models for capture-recapture data subject to imperfect detection, individual heterogeneity and misidentification ⋮ Full open population capture-recapture models with individual covariates ⋮ Likelihood-based genetic mark-recapture estimates when genotype samples are incomplete and contain typing errors ⋮ Spatial capture-recapture models ⋮ Trace-contrast models for capture-recapture without capture histories ⋮ Close-kin mark-recapture ⋮ Connecting the latent multinomial ⋮ Mark‐Recapture with Multiple, Non‐Invasive Marks

Cites Work

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• The Calculation of Posterior Distributions by Data Augmentation
• On the statistical analysis of capture experiments
• Parameterization and Bayesian Modeling
• ON THE UTILIZATION OF MARKED SPECIMENS IN ESTIMATING POPULATIONS OF FLYING INSECTS

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