Probabilistic Models for Error Correction of Nonuniform Sequencing Data

DOI10.1007/978-3-319-59826-0_6zbMath1457.68338MaRDI QIDQ3305524

Ziv Bar-Joseph, Marcel H. Schulz

Publication date: 7 August 2020

Published in: Algorithms for Next-Generation Sequencing Data (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/978-3-319-59826-0_6

Mathematics Subject Classification ID

92D20: Protein sequences, DNA sequences

68W32: Algorithms on strings

68Q87: Probability in computer science (algorithm analysis, random structures, phase transitions, etc.)

Uses Software

• Quake
• BLAT
• SPAdes
• Oases
• Fiona
• MetAMOS