Reaction-diffusion model Monte Carlo simulations on the GPU
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Publication:346346
DOI10.1016/J.JCP.2013.01.041zbMATH Open1349.76645arXiv1301.6082OpenAlexW2057666377MaRDI QIDQ346346FDOQ346346
Authors: Raoul D. Schram 
Publication date: 5 December 2016
Published in: Journal of Computational Physics (Search for Journal in Brave)
Abstract: We created an efficient algorithm suitable for graphics processing units (GPUs) to perform Monte Carlo simulations of a subset of reaction-diffusion models. The algorithm uses techniques that are specific to GPU programming, and combines these with the multispin technique known from CPU programming to create one of the fastest algorithms for reaction-diffusion models. As an example, the algorithm is applied to the pair contact process with diffusion (PCPD). Compared to a simple algorithm on the CPU, our GPU algorithm is approximately 4000 times faster. If we compare the performance of the GPU algorithm, between the GPU and CPU, we find a speed-up of about 130x.
Full work available at URL: https://arxiv.org/abs/1301.6082
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Cites Work
- Tables of maximally equidistributed combined LFSR generators
- General purpose molecular dynamics simulations fully implemented on graphics processing units
- GPU accelerated Monte Carlo simulation of the 2D and 3D Ising model
- Critical exponents of the pair contact process with diffusion
- GPU implementations of the Bond fluctuation model
- Multi-GPU accelerated multi-spin Monte Carlo simulations of the 2D Ising model
Cited In (6)
- Monte Carlo Simulation of Dynamic Systems on GPU’s
- GPU accelerated Monte Carlo simulation of Brownian motors dynamics with CUDA
- Computational Science - ICCS 2004
- An exact and efficient first passage time algorithm for reaction-diffusion processes on a 2D-lattice
- A framework for exploring numerical solutions of advection–reaction–diffusion equations using a GPU-based approach
- Title not available (Why is that?)
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