An algorithmic framework for motif discovery problems in weighted sequences

DOI10.1007/978-3-642-13073-1_30zbMATH Open1284.68712OpenAlexW1574479362MaRDI QIDQ3563014FDOQ3563014

Authors: Hui Zhang, Qing Guo, Costas S. Iliopoulos 

Publication date: 28 May 2010

Published in: Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/978-3-642-13073-1_30

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Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Algorithms on strings (68W32)

Cited In (9)

• Polynomial-time approximation algorithms for weighted LCS problem
• Polynomial-time approximation algorithms for weighted LCS problem
• Algorithms for extracting motifs from biological weighted sequences
• Parallel Discovery of Top-k Weighted Motifs in Large Graphs
• Compressed property suffix trees
• An approximation algorithm for alignment of multiple sequences using motif discovery
• A multiobjective optimization algorithm for the weighted LCS
• String Processing and Information Retrieval
• An efficient polynomial space and polynomial delay algorithm for enumeration of maximal motifs in a sequence

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