A New Approach to Protein Identification

DOI10.1007/11732990_31MaRDI QIDQ3596258zbMATHOpenAlexFDO

Authors Nuno Bandeira, Dekel Tsur, Ari Frank, Pavel Pevzner

Publication date 30 August 2007

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/11732990_31

zbMATH Keywords

protein identificationpost-translationally modified peptidestandem mass-spectrometry

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

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Cited in

(12)

• Implementation and Application of Automata
• A likelihood-based scoring method for peptide identification using mass spectrometry
• Efficient interpretation of tandem mass tags in top-down proteomics
• A robust algorithm for identification of proteins in a database
• Protein identification problem from a Bayesian point of view
• Indexing and searching a mass spectrometry database
• A fast algorithm and software for analysis of FT-ICR data
• Assessing the significance of peptide spectrum match scores
• Research in Computational Molecular Biology
• Towards mechanistic prediction of mass spectra using graph transformation
• Non-metric similarity search of tandem mass spectra including posttranslational modifications
• A new criterion and method for amino acid classification

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