A New Approach to Protein Identification

DOI10.1007/11732990_31zbMATH Open1302.92030OpenAlexW1576702637MaRDI QIDQ3596258FDOQ3596258

Authors: Nuno Bandeira, Dekel Tsur, Ari Frank, Pavel Pevzner 

Publication date: 30 August 2007

Published in: Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/11732990_31

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zbMATH Keywords

protein identificationpost-translationally modified peptidestandem mass-spectrometry

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

Cited In (12)

• Implementation and Application of Automata
• A fast algorithm and software for analysis of FT-ICR data
• Efficient interpretation of tandem mass tags in top-down proteomics
• Research in Computational Molecular Biology
• A likelihood-based scoring method for peptide identification using mass spectrometry
• Indexing and searching a mass spectrometry database
• Protein identification problem from a Bayesian point of view
• Non-metric similarity search of tandem mass spectra including posttranslational modifications
• Towards mechanistic prediction of mass spectra using graph transformation
• A robust algorithm for identification of proteins in a database
• A new criterion and method for amino acid classification
• Assessing the significance of peptide spectrum match scores

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