A Parsimony Approach to Genome-Wide Ortholog Assignment

DOI10.1007/11732990_47MaRDI QIDQ3596286zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang Zhong, Tao Jiang

Publication date 30 August 2007

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/11732990_47

zbMATH Keywords

gene duplicationcomparative genomicsortholog assignment

Mathematics Subject Classification ID

Genetics and epigenetics (92D10)

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(7)

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• Inferring clusters of orthologous and paralogous transcripts
• A network flow approach to the minimum common integer partition problem
• A local-global gene comparison for ortholog detection in two closely related eukaryotes species
• Gene orthology inference via large-scale rearrangements for partially assembled genomes

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