Storage and Retrieval of Individual Genomes

DOI10.1007/978-3-642-02008-7_9zbMath1345.68122OpenAlexW2147217460MaRDI QIDQ3630150

Veli Mäkinen, Jouni Sirén, Niko Välimäki, Gonzalo Navarro

Publication date: 3 June 2009

Published in: Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL: https://drops.dagstuhl.de/opus/volltexte/2008/1674/

zbMATH Keywords

suffix treefull-text indexingcompressed data structurescomparative genomics

Mathematics Subject Classification ID

Database theory (68P15) Genetics and epigenetics (92D10) Data structures (68P05) Information storage and retrieval of data (68P20)

Related Items (6)

FM-index of alignment: a compressed index for similar strings ⋮ Unnamed Item ⋮ FM-index of alignment with gaps ⋮ Unnamed Item ⋮ Top tree compression of tries ⋮ A compressed dynamic self-index for highly repetitive text collections

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