Coverage theories for metagenomic DNA sequencing based on a generalization of Stevens' theorem

DOI10.1007/S00285-012-0586-XzbMATH Open1275.05007OpenAlexW2077322651WikidataQ34298942 ScholiaQ34298942MaRDI QIDQ378317FDOQ378317

Karthik Kota, Michael C. Wendl, George M. Weinstock, Makedonka Mitreva

Publication date: 11 November 2013

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s00285-012-0586-x

zbMATH Keywords

microbiomeDNA sequencingcoveragemetagenomics

Mathematics Subject Classification ID

Optimal statistical designs (62K05) Geometric probability and stochastic geometry (60D05) Factorials, binomial coefficients, combinatorial functions (05A10) Mathematical biology in general (92B99)

Cites Work

• Title not available (Why is that?)
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• Occupancy modeling of coverage distribution for whole genome shotgun DNA sequencing
• Random Covering of Multiple One-Dimensional Domains with an Application to DNA Sequencing
• SOLUTION TO A GEOMETRICAL PROBLEM IN PROBABILITY

Uses Software

• Velvet
• BWA

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