Fine-tuning the search for microsatellites

DOI10.1016/j.jda.2012.12.007zbMath1334.68322OpenAlexW2033392736MaRDI QIDQ396641

P. V. Reyneke, T. R. Fourie, Bruce W. Watson, Derrick G. Kourie, Corne de Ridder

Publication date: 13 August 2014

Published in: Journal of Discrete Algorithms (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jda.2012.12.007

zbMATH Keywords

finite automatapattern matchingdetection algorithmmicrosatellite detectionrepeat detection

Mathematics Subject Classification ID

Formal languages and automata (68Q45) Protein sequences, DNA sequences (92D20) Algorithms on strings (68W32)

Uses Software

• SSRscanner
• TROLL
• IMEx
• T-REKS
• STAR

Cites Work

• Unnamed Item

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