Robust statistics, hypothesis testing, and confidence intervals for persistent homology on metric measure spaces

DOI10.1007/S10208-014-9201-4zbMATH Open1364.55016arXiv1206.4581OpenAlexW1969883941WikidataQ59442802 ScholiaQ59442802MaRDI QIDQ404272FDOQ404272

Authors: Andrew J. Blumberg, Itamar Gal, Michael A. Mandell, Matthew Pancia 

Publication date: 4 September 2014

Published in: Foundations of Computational Mathematics (Search for Journal in Brave)

Abstract: We study distributions of persistent homology barcodes associated to taking subsamples of a fixed size from metric measure spaces. We show that such distributions provide robust invariants of metric measure spaces, and illustrate their use in hypothesis testing and providing confidence intervals for topological data analysis.

Full work available at URL: https://arxiv.org/abs/1206.4581

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zbMATH Keywords

confidence intervalhypothesis testingpersistent homologyrobustnessstabilitymetric measure spacebarcode spacebottleneck metricGromov-Prohorov metric

Mathematics Subject Classification ID

Simplicial sets and complexes in algebraic topology (55U10) Computer graphics; computational geometry (digital and algorithmic aspects) (68U05)

Cites Work

• Finding the homology of submanifolds with high confidence from random samples
• Probability measures on the space of persistence diagrams
• The Structure and Stability of Persistence Modules
• Persistent homology -- a survey
• Limit theorems for Betti numbers of random simplicial complexes
• Statistical topology via Morse theory, persistence and nonparametric estimation
• Random geometric complexes
• Geometric inference for probability measures
• Fréchet means for distributions of persistence diagrams
• Stability of persistence diagrams
• Lipschitz functions have \(L_{p}\)-stable persistence
• Consistency of Single Linkage for High-Density Clusters
• Computing persistent homology
• Topological persistence and simplification
• Sampling from a Manifold
• Statistical topological data analysis using persistence landscapes
• Vietoris-Rips complexes of metric spaces near a closed Riemannian manifold
• On the local behavior of spaces of natural images
• On the geometry of metric measure spaces. I
• Zigzag persistence
• Order Statistics
• Persistence stability for geometric complexes
• Statistical theory in clustering
• Deconvolution for the Wasserstein metric and geometric inference
• Characterization, stability and convergence of hierarchical clustering methods
• Title not available (Why is that?)
• Convergence in distribution of random metric measure spaces (\(\Lambda \)-coalescent measure trees)
• Size functions from a categorical viewpoint
• The nilpotence theorem for the algebraic \(K\)-theory of the sphere spectrum
• Crackle: the homology of noise
• Another approach to asymptotics and bootstrap of randomly trimmed means
• A nonparametric confidence interval for the trimmed mean
• Lipschitz Correspondence between Metric Measure Spaces and Random Distance Matrices
• Gromov-Wasserstein distances and the metric approach to object matching

Cited In (31)

• Curvature sets over persistence diagrams
• Embeddings of persistence diagrams into Hilbert spaces
• Virtual persistence diagrams, signed measures, Wasserstein distances, and Banach spaces
• Multiple hypothesis testing with persistent homology
• Topological and metric properties of spaces of generalized persistence diagrams
• Another look at recovering local homology from samples of stratified sets
• A higher homotopic extension of persistent (co)homology
• The Persistence Landscape and Some of Its Properties
• Čech-Delaunay gradient flow and homology inference for self-maps
• \(A_\infty\) persistent homology estimates detailed topology from pointcloud datasets
• Statistical topology via Morse theory, persistence and nonparametric estimation
• Topological spaces of persistence modules and their properties
• Sliding windows and persistence: an application of topological methods to signal analysis
• Confidence sets for persistence diagrams
• Feature Detection and Hypothesis Testing for Extremely Noisy Nanoparticle Images using Topological Data Analysis
• Merge trees in discrete Morse theory
• Bottleneck profiles and discrete Prokhorov metrics for persistence diagrams
• A topological study of functional data and Fréchet functions of metric measure spaces
• Computing the multicover bifiltration
• Characterization of Gromov-type geodesics
• Universality of persistence diagrams and the bottleneck and Wasserstein distances
• Tropical Sufficient Statistics for Persistent Homology
• Understanding the topology and the geometry of the space of persistence diagrams via optimal partial transport
• Title not available (Why is that?)
• Expected invariants of simplicial complexes obtained from random point samples
• The gap between Gromov-Vague and Gromov-Hausdorff-vague topology
• Probabilistic Fréchet means for time varying persistence diagrams
• Stabilizing the unstable output of persistent homology computations
• Topological data analysis approaches to uncovering the timing of ring structure onset in filamentous networks
• A random persistence diagram generator
• Approximating continuous functions on persistence diagrams using template functions

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