Modeling the stochastic nature of gene regulation with Boolean networks

DOI10.1016/B978-0-12-814066-6.00005-2MaRDI QIDQ4627739zbMATH OpenOpenAlexFDO

Authors David Murrugarra, Boris Aguilar

Publication date 11 March 2019

Published in Algebraic and Combinatorial Computational Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/b978-0-12-814066-6.00005-2

zbMATH Keywords

Boolean networksgene regulationstochastic discrete dynamical systems

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10) Systems biology, networks (92C42) Stochastic network models in operations research (90B15)

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Cited in

(13)

• Dynamic information handling in continuous time Boolean network model of gene interactions
• An adjustable aperiodic model class of genomic interactions using continuous time Boolean networks (Boolean delay equations)
• Transactions on Computational Systems Biology IV
• Binarization of genetic expression data for the reconstruction of Boolean networks
• Stochastic dynamics: models for intrinsic and extrinsic noises and their applications
• Stochastic modelling of gene regulatory networks
• Modeling intrinsic noise in random Boolean networks
• Introduction to stochastic models in biology
• Canalization and symmetry in Boolean models for genetic regulatory networks
• Mechanisms of gene regulation: Boolean network models of the lactose operon in \textit{Escherichia coli}
• Probabilistic Boolean networks. The modeling and control of gene regulatory networks
• Modeling of molecular networks
• Dynamics of gene regulatory networks with stochastic propensities

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