Dynamic information handling in continuous time Boolean network model of gene interactions

DOI10.1016/J.NAHS.2008.03.001MaRDI QIDQ534394zbMATH OpenOpenAlexFDO

Authors Hakan Öktem

Publication date 17 May 2011

Published in Nonlinear Analysis. Hybrid Systems (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.nahs.2008.03.001

zbMATH Keywords

associative memoryBoolean networksgene networksregulatory dynamics

Mathematics Subject Classification ID

Complex (chaotic) behavior of solutions to functional-differential equations (34K23) Qualitative investigation and simulation of models involving functional-differential equations (34K60) Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

Recommendations

• Dynamic graphs and continuous Boolean networks. I: A hybrid model for gene regulation
• An adjustable aperiodic model class of genomic interactions using continuous time Boolean networks (Boolean delay equations)
• Temporal Boolean network models of genetic networks and their inference from gene expression time series.
• Modeling the dynamics of genetic regulatory networks: continuous and discrete approaches
• Modeling the stochastic nature of gene regulation with Boolean networks
• Dynamics of Boolean networks
• Relations between gene regulatory networks and cell dynamics in Boolean models
• Structural properties of continuous representations of Boolean functions for gene network modelling
• Boolean networks for modeling gene regulation

Cites work

• A Boolean delay equation model of colliding cascades. II: Prediction of critical transitions
• A survey on piecewise-linear models of regulatory dynamical systems
• An adjustable aperiodic model class of genomic interactions using continuous time Boolean networks (Boolean delay equations)
• Boolean Difference Equations, I: Formulation and Dynamic Behavior
• Collective dynamics of `small-world' networks
• Combinatorial explosion in model gene networks.
• Continuous genetic networks
• Dynamical behaviour of biological regulatory networks. II: Immunity control in bacteriophage lambda
• scientific article; zbMATH DE number 3858920 (Why is no real title available?)
• scientific article; zbMATH DE number 481933 (Why is no real title available?)
• scientific article; zbMATH DE number 1025912 (Why is no real title available?)
• scientific article; zbMATH DE number 1480198 (Why is no real title available?)
• scientific article; zbMATH DE number 2219890 (Why is no real title available?)
• Modeling genetic switches with positive feedback loops
• Multistationarity, the basis of cell differentiation and memory. I: Structural conditions of multistationarity and other nontrivial behavior
• Multistationarity, the basis of cell differentiation and memory. II: Logical analysis of regulatory networks in terms of feedback circuits
• On the regularization of Zeno hybrid automata
• Stability of genetic regulatory networks with time delay
• Temporal Boolean network models of genetic networks and their inference from gene expression time series.
• The Structure and Function of Complex Networks

Cited in

(8)

• Dynamic graphs and continuous Boolean networks. I: A hybrid model for gene regulation
• Dynamic graphs and continuous Boolean networks. II: Large-scale organic structures
• Dynamics of unperturbed and noisy generalized Boolean networks
• Stabilization and set stabilization of switched Boolean control networks via flipping mechanism
• Information transfer among coupled random Boolean networks
• An adjustable aperiodic model class of genomic interactions using continuous time Boolean networks (Boolean delay equations)
• Structural properties of continuous representations of Boolean functions for gene network modelling
• Research on modeling of genetic networks based on information measurement

This page was built for publication: Dynamic information handling in continuous time Boolean network model of gene interactions

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q534394)