scientific article; zbMATH DE number 4116363

MaRDI QIDQ4731047zbMATH OpenFDO

Authors Michael S. Waterman

Publication date 1989

zbMATH Keywords

alignment algorithmconsensus palindromesconsensus subsequencesDNAlong consensus patternsstring-matching

Mathematics Subject Classification ID

Searching and sorting (68P10) Computational methods for problems pertaining to biology (92-08) Genetics and epigenetics (92D10)

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(19)

• Pattern recognition in several sequences: Consensus and alignment
• Pattern recognition in genetic sequences by mismatch density
• A nonlinear measure of subalignment similarity and its significance levels
• Locally optimal subalignments using nonlinear similarity functions
• A survey of multiple sequence comparison methods
• A multiple sequence comparison method
• Interpreting consensus sequences based on plurality rule
• An efficient method for searching characteristic patterns of a subset in a large set of character sequences
• The computation of consensus patterns in \(DNA\) sequences
• Multiple sequence comparison -- a peptide matching approach
• Finding similar regions in many sequences
• The asymptotic plurality rule for molecular sequences
• Compression and approximate matching
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