scientific article; zbMATH DE number 4116366
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Publication:4731051
zbMath0681.92011MaRDI QIDQ4731051
Publication date: 1989
Title: zbMATH Open Web Interface contents unavailable due to conflicting licenses.
Constrained optimizationsecondary structuresRNA foldingbase pair energy rulesloop dependent energy rulesplanar graphs of bonded pairsSuboptimal folding algorithmssurvey of optimal folding algorithms
Applications of mathematical programming (90C90) Dynamic programming (90C39) Genetics and epigenetics (92D10)
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On topological indices for small RNA graphs ⋮ A Sparsified Four-Russian Algorithm for RNA Folding ⋮ RNA secondary structures in a polymer-zeta model how foldings should be shaped for sparsification to establish a linear speedup ⋮ A computational model for RNA multiple structural alignment ⋮ Secondary structure ensemble analysis via community detection ⋮ An action principle for biopolymer folding in vitro: A new perspective on the design of expeditiously-folded RNA molecules ⋮ A new family of metrics for biopolymer contact structures ⋮ Reidys' and Stadler's metrics for RNA contact structures ⋮ Sparse RNA Folding: Time and Space Efficient Algorithms
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