On topological indices for small RNA graphs

DOI10.1016/j.compbiolchem.2012.10.004zbMath1365.92081OpenAlexW2028713164WikidataQ85420270 ScholiaQ85420270MaRDI QIDQ2359348

Danny Barash, Idan Gabdank, Alexander Churkin

Publication date: 28 June 2017

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2012.10.004

zbMATH Keywords

Laplacian eigenvaluesRNA secondary structureRNA graph representationsmall RNA graphs

Mathematics Subject Classification ID

Applications of graph theory (05C90) Protein sequences, DNA sequences (92D20)

Uses Software

• Mfold
• miRBase
• RNAmute
• jViz.Rna
• RDMAS

Cites Work

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• RNA secondary structure: a complete mathematical analysis
• An edge version of the matrix-tree theorem and the wiener index
• Algorithms for Loop Matchings
• Characteristic vertices of trees^*

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