A COMBINATION OF REPLICA EXCHANGE MONTE CARLO AND ENERGY LANDSCAPE PAVING ALGORITHMS TO INCREASE THE EFFECTIVENESS OF CONFORMATIONAL SAMPLING

DOI10.1142/S0129183104006352zbMath1056.92018OpenAlexW2152529185MaRDI QIDQ4832367

Handan Arkin

Publication date: 4 January 2005

Published in: International Journal of Modern Physics C (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1142/s0129183104006352

zbMATH Keywords

conformational samplingpeptidesenergy landscape pavingreplica exchange method

Mathematics Subject Classification ID

Monte Carlo methods (65C05) Biochemistry, molecular biology (92C40) Biophysics (92C05)

Uses Software

• SMMP

Cites Work

• [SMMP A modern package for simulation of proteins]

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